BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012C10SP1|AL426343
(825 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1178 1635 0.0
>3x_Contig1178
Length = 7379
Score = 1635 bits (825), Expect = 0.0
Identities = 825/825 (100%)
Strand = Plus / Plus
Query: 1 atatatactgaattttaacatacatgtccccaacgcaagcatccttatcttcatcttctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5946 atatatactgaattttaacatacatgtccccaacgcaagcatccttatcttcatcttctg 6005
Query: 61 caccgcacttaagaaatagctttcactttttctttcatgaggttcgtaccatttgtctcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6006 caccgcacttaagaaatagctttcactttttctttcatgaggttcgtaccatttgtctcc 6065
Query: 121 tccagtcaaaggcaaaaaaaatgaatattgttatatcgaggactgttcggtgatgtaagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6066 tccagtcaaaggcaaaaaaaatgaatattgttatatcgaggactgttcggtgatgtaagg 6125
Query: 181 gttcttgaaaaattatctgttgacaactctccttaaatttgagcagaaatatctgattct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6126 gttcttgaaaaattatctgttgacaactctccttaaatttgagcagaaatatctgattct 6185
Query: 241 taattaggaaaattcagttttgatggagtacaggagaggggttgactagagggaaaatac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6186 taattaggaaaattcagttttgatggagtacaggagaggggttgactagagggaaaatac 6245
Query: 301 ttccagcagaatcaggtccacaggctgaaccttttactctcgcagcaccaagtacgtggc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6246 ttccagcagaatcaggtccacaggctgaaccttttactctcgcagcaccaagtacgtggc 6305
Query: 361 gggatccatgtccaatcctctgtgggttggacaggatccgcccccttagcataccctctc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6306 gggatccatgtccaatcctctgtgggttggacaggatccgcccccttagcataccctctc 6365
Query: 421 ccgtccacgattcctagtttccagcctaaccactacgcagcttaggcccagctctatcgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6366 ccgtccacgattcctagtttccagcctaaccactacgcagcttaggcccagctctatcgt 6425
Query: 481 ggccctattggcttgcactctctgtattgcatcgcaacgcttgcaggtagcactgcgtgc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6426 ggccctattggcttgcactctctgtattgcatcgcaacgcttgcaggtagcactgcgtgc 6485
Query: 541 ttgtgtgggtgaagttcttctcccaaccagtgggaaatagtgttgaagttttcgaaaatt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6486 ttgtgtgggtgaagttcttctcccaaccagtgggaaatagtgttgaagttttcgaaaatt 6545
Query: 601 caatacaaacattgaatagtttgaattacagcttagtgttaaaattagtattagaggcaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6546 caatacaaacattgaatagtttgaattacagcttagtgttaaaattagtattagaggcaa 6605
Query: 661 agtatctagtttgcatacgtcttaaactacattcataagatcttcaagcgaaggaaacgt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6606 agtatctagtttgcatacgtcttaaactacattcataagatcttcaagcgaaggaaacgt 6665
Query: 721 gaaacaactaacgatggcccaacgtgttactttcagaagaagaaacccatgtatgttttt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6666 gaaacaactaacgatggcccaacgtgttactttcagaagaagaaacccatgtatgttttt 6725
Query: 781 aaacaaaatgagaatcgaatagcaagtaccagcatgaatataatc 825
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6726 aaacaaaatgagaatcgaatagcaagtaccagcatgaatataatc 6770
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6301
Number of Sequences: 1807
Number of extensions: 6301
Number of successful extensions: 46
Number of sequences better than 1.0e-20: 1
length of query: 825
length of database: 10,358,551
effective HSP length: 16
effective length of query: 809
effective length of database: 10,329,639
effective search space: 8356677951
effective search space used: 8356677951
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)